SchulzLab/TEPIC

Include EIGEN Math library

Xethic opened this issue · 1 comments

Eigen seems very useful for our purpose because:

  1. It's a header-include only lib, so no compiler or system dependencies
  2. It naturally fits the HI-C data matrices format. (Parsing triples of: (x,y, value at (x,y)))
  3. Support for sparse matrices, plus implementing compress procedures, straight-forward iterating of non-zero values and various manipulation methods.

Included EIGEN library. See ac71396

Also implemented some small example code.