/PeptideBuilder

Primary LanguagePythonMIT LicenseMIT

PeptideBuilder: A simple Python library to generate model peptides.

Matthew Z. Tien, Dariya K. Sydykova, Austin G. Meyer, and Claus O. Wilke

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Installation

You can install PeptideBuilder with pip:

pip install PeptideBuilder

PeptideBuilder has one required dependency: Biopython

Examples

The examples folder contains two scripts showing typical usage. The script simpleExample.py is a brief example script demonstrating basic use of the PeptideBuilder library. The script evaluation.py reproduces the results presented in Table 1 of Tien et al. (2013).

Misc

The software is provided to you under the MIT license (see file LICENSE). The most up-to-date version of this software is available at https://github.com/clauswilke/PeptideBuilder.

To test whether your installation works properly, run pytest in the top-level project folder.

Reference:
M. Z. Tien, D. K. Sydykova, A. G. Meyer, C. O. Wilke (2013). PeptideBuilder: A simple Python library to generate model peptides. PeerJ 1:e80.