Sefi196

Postdoc in the Clark Lab at the University of Melbourne using single cell and long-read technologies to explore RNA isoforms in the human brain

University of Melbourne Melbourne

Pinned Repositories

IsoLamp
Isoform discovery from long-read amplicon sequencing data
Language:Shell12
BLAZE
SingleCell Nanopore sequencing data analysis
Language:Python00
discoAnt
Language:Shell00
FLAMES
Language:C++00
LR_scRNAseq_analysis_thesis_chapter3
Language:R01
RNA_Deg
This Repo contains scripts and data files needed to produce results and figures presented in paper titled "Pervasive effects of RNA degradation on Nanopore direct RNA sequencing"
Language:R01
sc_workflow_cortex_organoids
Working analysis repo for single cell long read analysis - cortex organoids
Language:R00
scAnnotatR
Language:R00
wf-single-cell
Language:Python6833
BLAZE
SingleCell Nanopore sequencing data analysis
Language:Python466

Sefi196's Repositories

Sefi196/sc_workflow_cortex_organoids
Working analysis repo for single cell long read analysis - cortex organoids
Language:R
Sefi196/discoAnt
Language:Shell
Sefi196/RNA_Deg
This Repo contains scripts and data files needed to produce results and figures presented in paper titled "Pervasive effects of RNA degradation on Nanopore direct RNA sequencing"
Language:R1
Sefi196/BLAZE
SingleCell Nanopore sequencing data analysis
Language:Python
Sefi196/LR_scRNAseq_analysis_thesis_chapter3
Language:R1
Sefi196/FLAMES
Language:C++
Sefi196/scAnnotatR