Pinned Repositories
documentation_builder
This container builds our documentation using nanoc
oozie-sge
This is a repository for the SeqWare Oozie-SGE plugin. It lives outside of the main SeqWare repository because it's really an extension of Oozie to support SGE and not specific to SeqWare per se.
portal
Provided as-is, this is the unsupported SeqWare Portal as of the 1.1.0-beta
public-workflows
A place to collaborate on public SeqWare workflows
queryengine
A HBase backed variant database for performing queries on VCF-style data
seqware
This is the SeqWare Project's main repo.
seqware-sandbox
A location where we can explore new SeqWare sub-projects, tools, and prototypes before they are ready for the main repo.
seqware.github.com
SeqWare home pages
seqware_full
This is the container that houses SeqWare with a full set of dependencies including SGE, Hadoop, and Oozie
seqware_whitestar
This is the container that houses SeqWare WhiteStar with a minimal set of dependencies
SeqWare's Repositories
SeqWare/seqware
This is the SeqWare Project's main repo.
SeqWare/queryengine
A HBase backed variant database for performing queries on VCF-style data
SeqWare/public-workflows
A place to collaborate on public SeqWare workflows
SeqWare/seqware-sandbox
A location where we can explore new SeqWare sub-projects, tools, and prototypes before they are ready for the main repo.
SeqWare/seqware_whitestar
This is the container that houses SeqWare WhiteStar with a minimal set of dependencies
SeqWare/oozie-sge
This is a repository for the SeqWare Oozie-SGE plugin. It lives outside of the main SeqWare repository because it's really an extension of Oozie to support SGE and not specific to SeqWare per se.
SeqWare/seqware.github.com
SeqWare home pages
SeqWare/documentation_builder
This container builds our documentation using nanoc
SeqWare/portal
Provided as-is, this is the unsupported SeqWare Portal as of the 1.1.0-beta
SeqWare/seqware-bag
Ansible playbooks for deploying SeqWare with metadata for Bindle
SeqWare/seqware_full
This is the container that houses SeqWare with a full set of dependencies including SGE, Hadoop, and Oozie
SeqWare/seqware_test_environment
Sets up a test environment for SeqWare continuous integration testing on Travis-CI
SeqWare/unstable.seqware.io
Repository for hosting our 1.1 docs in progress