/MDAtoolkits

Different analysis for metabolic data

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MDAtoolkits

R version lifecycle license Myblog

Getting started

Dependence

if(!require(devtools)){
install.packages("remotes")
install.packages("devtools")
}
## tidymass
remotes::install_gitlab("tidymass/tidymass")

devtools::install_github("SamGG/ropls")
devtools::

Update information

Jan 18, 2024

Version：0.0.1 => 0.0.2

  1. Delete mda_CTS_kegg. It was found that the ID conversion results provided by CTS are unstable. For example, converting KEGG ID through INCHIKEY yields inconsistent results across multiple attempts. Suggest using mda_name2kegg.

  2. Added the ssl.verifypeer parameter to function cbf_wrawler and observed certificate expiration issues on both the CBF and CTS websites. This may result in content retrieval failure. The default parameter is set to TRUE. If no results are returned, it is likely a certificate issue. Manually set the ssl.verifypeer parameter to FALSE in such cases.

  3. Old scripts were archived.