DRAMP3.0

Scripts for code and statistics analysis of DRAMP 3.0

The program provides the source code of the DRAMP database and some statistics analysis.

Directory structure:

/DRAMP_origin_source/

It contains the origin source code of the DRAMP database

Sequence data of four databases.xlsx

It contains sequence data of APD, CAMP, DBAASP and DRAMP as of 2021.1.1 (which excludes sequences that are redundant, predicted or longer than 100 amino acids)

Analysis data of stapled AMPs in DRAMP.xlsx

It contains data of 181 stapled AMPs in DRAMP and some shallow analysis of such data

comparison among four databases.ipynb

The code can calculate the intersection of different datasets

sequence analysis.ipynb

The code can draw bar of pie and dount charts of sequence analysis results.