Pinned Repositories
AF_unmasked
Source code and examples for AlphaFold Unmasked
DLPacker
DLPacker
GCNdesign
Neural network model for prediction of amino-acid sequence from a protein backbone structure
gELpred
GroE substrate prediction
invariant-point-attention
Implementation of Invariant Point Attention, used for coordinate refinement in the structure module of Alphafold2, as a standalone Pytorch module
mican
Non-sequential structural alignment program for protein structure
pdb-tools
A dependency-free cross-platform swiss army knife for PDB files.
PDBBasic
Basic Utilities for Protein Structure Data
pdbutil
A simple module for handling protein backbone coordinates.
PyDSSP
A simplified implementation of DSSP algorithm for PyTorch and NumPy
ShintaroMinami's Repositories
ShintaroMinami/PyDSSP
A simplified implementation of DSSP algorithm for PyTorch and NumPy
ShintaroMinami/GCNdesign
Neural network model for prediction of amino-acid sequence from a protein backbone structure
ShintaroMinami/mican
Non-sequential structural alignment program for protein structure
ShintaroMinami/PDBBasic
Basic Utilities for Protein Structure Data
ShintaroMinami/AF_unmasked
Source code and examples for AlphaFold Unmasked
ShintaroMinami/DLPacker
DLPacker
ShintaroMinami/gELpred
GroE substrate prediction
ShintaroMinami/invariant-point-attention
Implementation of Invariant Point Attention, used for coordinate refinement in the structure module of Alphafold2, as a standalone Pytorch module
ShintaroMinami/pdb-tools
A dependency-free cross-platform swiss army knife for PDB files.
ShintaroMinami/pdbutil
A simple module for handling protein backbone coordinates.
ShintaroMinami/tenhou-log-utils
Utility tools for tenhou.net log