Calculating sheets

[ahof1704]

Hi,

Thank you for the great tool! I have managed to run pydssp and the output shows me where the helices and strands are such as shown below:
--EE--HHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHH----EEE-----------EEEE------EEEE-----

I was wondering if there is a way to use pydssp to also obtain information on how these strands are forming sheets. It could as simple as how many sheets are being formed.

Thanks in advance!

[ShintaroMinami]

So sorry for delayed reply. I would suggest to use h-bond map to identify beta-strand pairing. You can get h-bond map with the function
pydssp.get_hbond_map()