ShujiaHuang
A bioinformatician, human genome researcher and programmer.
Guangzhou women and children‘s medical centerGuangzhou,China
Pinned Repositories
basevar
This is the official development repository for BaseVar, which call variants for large-scale ultra low-pass (<1.0x) WGS data, especially for NIPT data
bioweekly
这里记录每周值得分享的生命科学和生物信息学进展内容，周日发布。
cmdbtools
Command line tools for CMDB varaints browser
Cpp-Primer-Plus-6th
《C++ Primer Plus 第6版（中文版）》原书代码、习题答案和个人笔记，仅供学习和交流。
draw_ngs
Programs for drawing chromosome figure by using NGS data
geneview
Genomics data visualization in Python by using matplotlib.
ilus
A lightweight and handy variant calling pipeline generator for whole-genome sequencing (WGS) and whole exom sequencing data (WES) analysis. 一个简易且全面的 WGS/WES 分析流程生成器.
qmplot
A Python package for creating high-quality manhattan and Q-Q plots from GWAS results.
RefHap
A Reliable and Fast Algorithm for Single Individual Haplotyping
ShujiaHuang's Repositories
ShujiaHuang/Cpp-Primer-Plus-6th
《C++ Primer Plus 第6版（中文版）》原书代码、习题答案和个人笔记，仅供学习和交流。
ShujiaHuang/ilus
A lightweight and handy variant calling pipeline generator for whole-genome sequencing (WGS) and whole exom sequencing data (WES) analysis. 一个简易且全面的 WGS/WES 分析流程生成器.
ShujiaHuang/geneview
Genomics data visualization in Python by using matplotlib.
ShujiaHuang/qmplot
A Python package for creating high-quality manhattan and Q-Q plots from GWAS results.
ShujiaHuang/basevar
This is the official development repository for BaseVar, which call variants for large-scale ultra low-pass (<1.0x) WGS data, especially for NIPT data
ShujiaHuang/cmdbtools
Command line tools for CMDB varaints browser
ShujiaHuang/bioweekly
这里记录每周值得分享的生命科学和生物信息学进展内容，周日发布。
ShujiaHuang/SOAPaligner
SOAPaligner(also named soap2) is a member of the SOAP (Short Oligonucleotide Analysis Package). It is an updated version of SOAP software for short oligonucleotide alignment.
ShujiaHuang/genotools
A NGS data analysis toolkit
ShujiaHuang/ShujiaHuang.github.io
GitHub homepage of huangshujia.me
ShujiaHuang/liusylab.org
The source code for the Siyang Liu lab website (Base on HUGO)
ShujiaHuang/pumpkin-book
《机器学习》（西瓜书）公式推导解析，在线阅读地址：https://datawhalechina.github.io/pumpkin-book
ShujiaHuang/book
ShujiaHuang/ngslib
A C++ library for reading high-throughput sequencing data.
ShujiaHuang/ShujiaHuang
ShujiaHuang/speedseq
A flexible framework for rapid genome analysis and interpretation
ShujiaHuang/speedwgs
ShujiaHuang/biocalendar
一个碱基日历，每天一更
ShujiaHuang/ChatDoctor
ShujiaHuang/china_city_dataset
**城市数据集
ShujiaHuang/d2l-zh
《动手学深度学习》：面向中文读者、能运行、可讨论。中英文版被55个国家的300所大学用于教学。
ShujiaHuang/fullstackpython.com
Full Stack Python source with Pelican, Bootstrap and Markdown.
ShujiaHuang/geneview-data
Data repository for geneview examples
ShujiaHuang/HGPP
Human Genome Haplotype resolved Program Package
ShujiaHuang/hugo-theme-stack
Card-style Hugo theme designed for bloggers
ShujiaHuang/hugo-theme-zzo
Make a blog with hugo zzo theme!
ShujiaHuang/merge
ShujiaHuang/missingpy
Missing Data Imputation for Python
ShujiaHuang/olympus-data
ShujiaHuang/VariantBam
Filtering and profiling of next-generational sequencing data using region-specific rules