ShuoStat
Statistics, Bioinformatics, Epidemiology, Medicine
Institute of Medical Biometry and Statistics(IMBI) of Freiburg UniversityFreiburg, Germany
Pinned Repositories
Contributions
Contribute Packages to Bioconductor
DESeq2
Differential expression of RNA-seq data using the Negative Binomial
findIPs
The package aims at detecting IPs based on case deletion and quantifies their effects by measuring the weighted rank changes. The package applies a novel rank comparing measure using the adaptive weights that stress the top-ranked important features and adjust the weights to ranking properties.
IPs_in_HD
The repository comprise the data and codes for reproducing the results of the influential points (IPs) detection in HD.
IPs_on_feature_rankings
The data and codes for reproducing the results in the paper: detect influential points of the feature rankings.
mboostIPs
This is an extension for mboost specified defined for IPs detection. So far, the package support the IPs detection for glmboost() function.
MMModels
Provide the codes and data for reproducing the results: construct prognostic models of multiple myeloma with pathway information incorporated
MMMs
MMMs packages included several prognostic models for Multiple myeloma (MM). Unlike previous models that were constructed based on genes, These models in MMMs were constructed using pathways information.
RIE
A metrics for accessing the model false selection
SummarizedExperiment
SummarizedExperiment container
ShuoStat's Repositories
ShuoStat/MMMs
MMMs packages included several prognostic models for Multiple myeloma (MM). Unlike previous models that were constructed based on genes, These models in MMMs were constructed using pathways information.
ShuoStat/DESeq2
Differential expression of RNA-seq data using the Negative Binomial
ShuoStat/findIPs
The package aims at detecting IPs based on case deletion and quantifies their effects by measuring the weighted rank changes. The package applies a novel rank comparing measure using the adaptive weights that stress the top-ranked important features and adjust the weights to ranking properties.
ShuoStat/IPs_in_HD
The repository comprise the data and codes for reproducing the results of the influential points (IPs) detection in HD.
ShuoStat/IPs_on_feature_rankings
The data and codes for reproducing the results in the paper: detect influential points of the feature rankings.
ShuoStat/mboostIPs
This is an extension for mboost specified defined for IPs detection. So far, the package support the IPs detection for glmboost() function.
ShuoStat/MMModels
Provide the codes and data for reproducing the results: construct prognostic models of multiple myeloma with pathway information incorporated
ShuoStat/RIE
A metrics for accessing the model false selection
ShuoStat/SummarizedExperiment
SummarizedExperiment container