This package was one of the results of my thesis project and has been partially integrated into a much more feature rich package
Available here https://github.com/SinomeM/CNVgears
Small set of R functions to analyze Copy Number Variations data.
The following packages are required for cnvgeaRs functions to work: "dplyr", "magrittr", "ggplot2", "data.table", "foreach", "doParallel", "RcppRoll", "stats".
Pre-built R package is provided, see "release".