Slicer
Multi-platform, free and open source software package for visualization and medical image computing.
Worldwide
Pinned Repositories
ExtensionsIndex
Slicer extensions index
light-the-torch
Install PyTorch distributions with computation backend auto-detection
Slicer
Multi-platform, free open source software for visualization and image computing.
SlicerDocker
Build, package, test, and run 3D Slicer and Slicer Extensions in Docker.
SlicerExecutionModel
An open-source CMake-based project that provides macros and associated tools for the easy building of 3D Slicer command line interface (CLI) modules.
SlicerGitSVNArchive
:warning: OBSOLETE | Multi-platform, free open source software for visualization and image computing.
SlicerJupyter
Extension for 3D Slicer that allows the application to be used from Jupyter notebook
SlicerLungCTAnalyzer
This is a 3D Slicer extension for segmentation and spatial reconstruction of infiltrated, collapsed, and emphysematous areas in lung CT.
SlicerNotebooks
Examples that illustrate how to use 3D Slicer via Jupyter notebooks in Python
SlicerSOFA
3D Slicer extension to enable simulations using the SOFA framework
Slicer's Repositories
Slicer/SlicerGitSVNArchive
:warning: OBSOLETE | Multi-platform, free open source software for visualization and image computing.
Slicer/BRAINSTools
WARNING: This is NOT the official upstream BRAINSTools git repository
Slicer/Slicer-BSplineDeformableRegistration
:warning: OBSOLETE | Legacy Slicer module - Registers two images together using BSpline transform and mutual information
Slicer/slicer.kitware.com-midas3-archive
This project is a snapshot of the data historically served from slicer.kitware.com/midas3
Slicer/OpenIGTLinkIF
DISCONTINUED - See https://github.com/openigtlink/OpenIGTLinkIF - OpenIGTLink IF module manages communications between 3D Slicer and other OpenIGTLink-compliant software through the network.
Slicer/ParameterSerializer
An open-source library for serialization and deserialization of Insight Segmentation and Registration Toolkit (ITK) classes.
Slicer/qMidasAPI
DISCONTINUED - Use http://github.com/commontk/qRestAPI
Slicer/Slicer-i18n
Repository to track tasks and store resources related to internationalization (i18n) of 3D Slicer.
Slicer/Slicer-OpenSSL
OpenSSL sources and builds used in Slicer-based projects.
Slicer/Slicer-OtsuThresholdImageFilter
Legacy Slicer module - This filter creates a binary thresholded image that separates an image into foreground and background components
Slicer/SlicerDataStore
This project organizes Slicer sample data, atlases and registration case library images.
Slicer/SlicerRegistrationLibrary
Library of registration cases including step-by-step instructions and discussions
Slicer/actions-codespell
WARNING: This is NOT the official upstream actions-codespell git repository
Slicer/cppzmq
WARNING: This is NOT the official upstream cppzmq git repository
Slicer/curl
Curl is a tool and libcurl is a library for transferring data with URL syntax, supporting FTP, FTPS, HTTP, HTTPS, GOPHER, TFTP, SCP, SFTP, TELNET, DICT, LDAP, LDAPS, FILE, IMAP, SMTP, POP3, RTSP and RTMP. libcurl offers a myriad of powerful features
Slicer/itkMGHImageIO
Fork used for historical reference and to ensure older versions of ITK and Slicer can be built.
Slicer/ITKPythonPackage
:warning: OBSOLETE | Fork used to host Slicer specific ITK wheels as releases
Slicer/LeapCxx
Implementation of older C++ API using LeapC
Slicer/lib_lzma
A general purporse LZMA2 data compression library
Slicer/Midas
An open-source application that enables the rapid creation of tailored, web-enabled data storage
Slicer/numpy
⚠️ OBSOLETE | WARNING: This is NOT the official upstream numpy git repository
Slicer/opencv_contrib
Repository for OpenCV's extra modules
Slicer/OpenCVExample
This is an example of a Slicer extension that depends on the SlicerOpenCV extension.
Slicer/OpenIGTLink
Free, open-source network communication library for image-guided therapy
Slicer/setuptools
⚠️ OBSOLETE | Slicer fork of Setuptools build system
Slicer/Slicer-DataStore
Slicer module to Download, Upload and Browse MRB datasets stored in a Midas database
Slicer/SlicerGitMigrationDataRemoved
:warning: OBSOLETE | Storing large data files extracted from Slicer history
Slicer/SlicerGraphCutSegment
3D Slicer extension for graph cut based segmentation
Slicer/SlicerLegacyModules
Collection of legacy Slicer modules
Slicer/tclap
WARNING: This is NOT the official upstream tclap git repository