Lectures, labs and all documents associated with Spring 2022 short course.
For this course, we will be using SlicerMorphCloud. Please follow these instructions to access it. As a backup, we advise installing 3D Slicer and SlicerMorph extension to your laptop. You can download 3D Slicer from https://download.slicer.org (use the latest preview) and instructions for installing SlicerMorph can be found here. We also suggest installing R and Rstudio locally on your computer. Both are available on the SlicerMorphCloud.
Good to haves:
- A large external monitor (dual screen is preferred)
- A three-buttoned mouse.
Accounts: Please obtain an account on these websites prior to workshop
- MorphoSource: https://morphosource.org (so that you can download datasets directly from MorphoSource to the SlicerMorphCloud)
- Slicer Forum, https://discourse.slicer.org (alternatively you can use your github or google accounts to signup)
- Please sign up for the SlicerMorph announcement to keep up-to-date with SlicerMorph project and extension updates http://mailman11.u.washington.edu/mailman/listinfo/slicermorph-announcements
Important Websites:
- Official SlicerMorph Github repository
- Official SlicerMorph Module Documentations
- SlicerMorph YouTube Channel for video tutorials
- Link to submit interesting images. Please know that we might post these on twitter or on our website
Development of SlicerMorph and the intense workshops are generously funded by National Science Foundation Advances in Bioinformatics collobrative research grants to Murat Maga (ABI-1759883). SlicerMorphCloud is made available through NSF's The Extreme Science and Engineering Discovery Environment (XSEDE).