Snakemake-Profiles/slurm

Remove dependency on pandas

frankier opened this issue · 1 comments

Pandas is not a dependency of Snakemake. As such it would be nice to not add it an an extra dependency here.

For now, I moved the pandas import to a function that is used in the advanced argument conversion which I guess you're not making use of, right? I agree this dependency should eventually be removed entirely and replaced by simpler functionality as all it does is store the cluster configuration in a table.