Spatial-Systems-Biology-Freiburg/eDPM

cleanup commit b2e914742abf26f5ea20e7437fbbe81a1df595b0

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Commit b2e9147 introduced the covariance matrix to the calculation.
Some parts of the changes should be rethough/dropped:

  1. pool_model_make_plots.py had inserted some more comments. This should be dropped
  2. src/solving.py now calculates the relative error with 25% which is not desired since it can not be adjusted from outside in any form. Also: how could we possibly supply a absolute error or avoid computing the covariance matrix. I can see that relative error calculation is desired but the current implementation should be generalized.
  3. pool_model.py got an empty line commited. Drop that change.
  1. Commit a5a9448
  2. Commit 1bb69bf: Add choice of covariance matrix method