Pinned Repositories
blockstructure
Code accompanying the manuscript "Modularity and stability of ecological communities", by Jacopo Grilli & Stefano Allesina
BSD-QBio2
Second BSD QBio Boot Camp
BSD-QBio3
BSD Bootcamp on Quantitative Biology 3
BSD-QBio4
Fourth BSD Quantitative Biology Bootcamp @ MBL
BSD-QBio5
Fifth UChicago BSD QBio boot camp at MBL
ICTP_Winter_School
ISC
Materials for "Introduction to Scientific Computing for Biologists -- a Toolbox" by Stefano Allesina & Madlen Wilmes
LV_intra
Code accompanying the manuscript "Intraspecific variation stabilizes classic predator-prey dynamics"
R3CR
material for guest lectures for R3CR
randomzoo
Code accompanying the manuscript "Coexistence of many species in random ecosystems", by Carlos A. Servan et al.
StefanoAllesina's Repositories
StefanoAllesina/BIOS_26318
StefanoAllesina/Theoretical_Community_Ecology
Lecture notes on theoretical community ecology
StefanoAllesina/cv
my cv, pulling data from tables and bib files; made in RMD thanks to https://github.com/mitchelloharawild/vitae
StefanoAllesina/Theoretical_Ecology_2024
Lecture notes for Theoretical Ecology (Part 1); AY 2023-2024
StefanoAllesina/lemos-costa-2023
Code and data accompanying the manuscript "Phylogeny structures species' interactions in experimental ecological communities"
StefanoAllesina/GLV_HOIs
Generalized Lotka-Volterra model with Higher-Order Interactions
StefanoAllesina/skwara_et_al_2022
Code and data accompanying "Modeling ecological communities when composition is manipulated experimentally", by Skwara et al., 2022
StefanoAllesina/ecoshake_oct_2022
Ecoshake workshop on data manipulation
StefanoAllesina/StefanoAllesina.github.io
A minimalist Jekyll theme for running a personal blog powered by Jekyll and GitHub Pages
StefanoAllesina/glv_embedding
code and paper on GLV embedding of ecological/epidemiological dynamical systems
StefanoAllesina/Sao_Paulo_School
Lecture notes for ICTP-SAFIR "School on Community Ecology: from patterns to principles", Jan 20-25 2019
StefanoAllesina/LV_intra
Code accompanying the manuscript "Intraspecific variation stabilizes classic predator-prey dynamics"
StefanoAllesina/QuEST_workshop
Workshop on scientific writing for QuEST, April 2021
StefanoAllesina/ICTP_Winter_School
StefanoAllesina/Fundamentals_Bio_Data_Analysis
Materials for the class
StefanoAllesina/testweb
StefanoAllesina/material_qBio6_advanced_computing
StefanoAllesina/R3CR
material for guest lectures for R3CR
StefanoAllesina/CSB_2020
Lecture notes and exercises for Computing Skills for Biologists --- Winter 2020
StefanoAllesina/paper-tsibble
A new tidy data structure to support exploration and modeling of temporal data
StefanoAllesina/evora
Computational Tools for Biologists
StefanoAllesina/BSD-QBio5
Fifth UChicago BSD QBio boot camp at MBL
StefanoAllesina/music_auto2
Automatic pagination of music for visually impaired musicians
StefanoAllesina/CSB_2019
Lecture notes and exercises for Computing Skills for Biologists --- Winter 2019
StefanoAllesina/SZN
Class on data wrangling and visualization @ Stazione Zoologica Anton Dohrn
StefanoAllesina/BSD-QBio4
Fourth BSD Quantitative Biology Bootcamp @ MBL
StefanoAllesina/BSD-QBio3
BSD Bootcamp on Quantitative Biology 3
StefanoAllesina/randomzoo
Code accompanying the manuscript "Coexistence of many species in random ecosystems", by Carlos A. Servan et al.
StefanoAllesina/music_auto
Musical automation --- Winter 2018
StefanoAllesina/week10
Exercises for week 10 ICSB