Kornfeld laboratory

autodoc

This is a repository for automatic generation of docstrings

DeepFocus

emcaps

Code for the paper "Genetically encoded barcodes for correlative volume electron microscopy"

kimimaro

Skeletonize densely labeled 3D image segmentations.

LightConvPoint

MorphX

Toolkit for exploration and segmentation of 3D morphologies.

NeuronX

Application of Morphx to neurons

SyConn

Toolkit for the generation and analysis of volume eletron microscopy based synaptic connectomes of brain tissue.

SyConn-Neuroglancer

Adaptation of the WebGL-based volumetric viewer https://github.com/google/neuroglancer. Provides an analysis interface for filtering neurons based on properties, the identification of pre- and postsynaptic neurons or the listing of different cell types

SyConn2Scripts

StructuralNeurobiologyLab/SyConn

Toolkit for the generation and analysis of volume eletron microscopy based synaptic connectomes of brain tissue.

StructuralNeurobiologyLab/autodoc

This is a repository for automatic generation of docstrings

StructuralNeurobiologyLab/MorphX

Toolkit for exploration and segmentation of 3D morphologies.

StructuralNeurobiologyLab/kimimaro

Skeletonize densely labeled 3D image segmentations.

StructuralNeurobiologyLab/LightConvPoint

StructuralNeurobiologyLab/SyConn-Neuroglancer

Adaptation of the WebGL-based volumetric viewer https://github.com/google/neuroglancer. Provides an analysis interface for filtering neurons based on properties, the identification of pre- and postsynaptic neurons or the listing of different cell types

StructuralNeurobiologyLab/DeepFocus

StructuralNeurobiologyLab/emcaps

Code for the paper "Genetically encoded barcodes for correlative volume electron microscopy"

StructuralNeurobiologyLab/NeuronX

Application of Morphx to neurons

StructuralNeurobiologyLab/SyConn2Scripts

StructuralNeurobiologyLab/beach_collection