Pinned Repositories
AKLIMATE_scripts
cell-atlas
clustermethods
Code to run different clustering methods on a dataset and compare the results.
deep_essentiality
deep learning for predicting gene essentiality
hexmap-view
kinase-TF-regulome
leesl
Simple implementation of Lee's bivariate spatial association metric.
monocle-docker
Environment for executing the monocle trajectory inference algorithm. Contains functions to convert the output to common formats.
stuartlab-scripts
Repository for Josh Stuart's UCSC lab
traj-formats
Format specifications for communicating trajectory information.
Stuartlab-UCSC's Repositories
Stuartlab-UCSC/traj-restapi
RestAPI for trajectory information
Stuartlab-UCSC/traj-commons
Stuart Lab's all things trajectory repo
Stuartlab-UCSC/czi-projects
a list of all projects
Stuartlab-UCSC/sample_cluster_to_protograph
Stuartlab-UCSC/leesl
Simple implementation of Lee's bivariate spatial association metric.
Stuartlab-UCSC/stuartlab-scripts
Repository for Josh Stuart's UCSC lab