Su's Lab in Biomedical Informatics
Su's lab focuses on research in biomedical informatics, artificial intelligence, and graph-based algorithms.
Indianapolis, IN
Pinned Repositories
aou_acidosis
Health disparities of acidosis risks in the All of Us population
ardac
The AlcHepNet Research Data Commons, or ARDaC, is an integrative environment for exploring the clinical and omics data generated by AlcHepNet and related translational studies, and for investigators within the network to access data. ARDaC is sponsored by National Institute on Alcohol Abuse and Alcoholism.
cloud-automation
Automation for standing up Gen3 commons
data-portal
Windmill: data portal for metadata submission and query
DIStudio
Drug Informatics Studio
DSTG
Deconvoluting Spatial Transcriptomics Data through Graph-based Artificial Intelligence
eCLASR
FNASubtype
jLINDAW
pLINDAW: A Fuzzy Query Based Data Warehouse System for pan-LINCS data integration, fuzzy query on multiple similarity metrics, and real-time data mining and visualization
L1kProcs
L1Procs is a parallel R package for L1000 data processing and analyzing. Major function of L1KProcs includes (a) l1kpreprocs, which preprocesses raw data, and generates normalized gene expression data; (b) egem, which provides some interesting genes as target related genes, and potential transcription factors involved in the function of the compounds; (c) csNMF, which can detect compound signatures, and provide interesting compounds as drug candidates.
Su's Lab in Biomedical Informatics's Repositories
Su-informatics-lab/DSTG
Deconvoluting Spatial Transcriptomics Data through Graph-based Artificial Intelligence
Su-informatics-lab/ardac
The AlcHepNet Research Data Commons, or ARDaC, is an integrative environment for exploring the clinical and omics data generated by AlcHepNet and related translational studies, and for investigators within the network to access data. ARDaC is sponsored by National Institute on Alcohol Abuse and Alcoholism.
Su-informatics-lab/aou_acidosis
Health disparities of acidosis risks in the All of Us population
Su-informatics-lab/ardac-dict
ARDaC dictionary
Su-informatics-lab/cloud-automation
Automation for standing up Gen3 commons
Su-informatics-lab/data-portal
Windmill: data portal for metadata submission and query
Su-informatics-lab/DIStudio
Drug Informatics Studio
Su-informatics-lab/drug_disease_graph
Su-informatics-lab/guppy
Server that supports GraphQL queries on data from Elasticsearch
Su-informatics-lab/aou_aud_disparity
Su-informatics-lab/ardac-website
Content for the https://ardac.org website
Su-informatics-lab/cdis-manifest
ARDaC manifests
Su-informatics-lab/eCLASR
Su-informatics-lab/eCLASR-EMR
Su-informatics-lab/eCLASR-Phenotyping
Su-informatics-lab/eCLASR-RevealingSnow
Su-informatics-lab/icu-contour
Su-informatics-lab/alchepnet-website
AlcHepNet.org website
Su-informatics-lab/ardac-etl
ETL workflows for ARDaC
Su-informatics-lab/ardac-portal
Data portal for ARDaC
Su-informatics-lab/AUDIT-C_LLMs
Su-informatics-lab/depot
Su-informatics-lab/gen3-helm
Helm charts for Gen3 Deployments
Su-informatics-lab/indiana_precision_oncology
Su-informatics-lab/ipo-cdm
Indiana Precision Oncology (IPO) Common Data Model
Su-informatics-lab/ipo-dictionary
IPO data dictionary
Su-informatics-lab/llm_drug_effect
Su-informatics-lab/lola
Su-informatics-lab/rxnorm_gatortron
Su-informatics-lab/trajvis