/Wikidata-phenomizer

Incorporate wikidata statements into phenomizer

Primary LanguageJupyter NotebookMIT LicenseMIT

Wikidata-phenomizer

Incorporate wikidata statements into phenomizer

  1. Download HPO Annotation file "phenotype_annotation.tab".
  2. Run phenomizer.py to generate a modified gaf file with annotations taken from wikidata
  3. Run Phenomizer java program here.