Pinned Repositories
decifer
DeCiFer is an algorithm that simultaneously selects mutation multiplicities and clusters SNVs by their corresponding descendant cell fractions (DCF).
1000G-Depth-extraction
CRUST
R package for clonal deconvolution
DeCiFer-scripts-for-NB_Mets-NatComm24
ggGWAS
R package 📦 with ggplot2 extensions for GWAS summary statistics
pyclone
Probabilistic model for inferring clonal population structure from deep NGS sequencing.
region-plot
A tool to plot significant regions of GWAS
SAIGE
SignatureAnalyzer
Updated SignatureAnalyzer-GPU with mutational spectra & RNA expression compatibility.
tidymanhattan
Tidyverse supported R package for GWAS data visualization
Subhayan18's Repositories
Subhayan18/CRUST
R package for clonal deconvolution
Subhayan18/1000G-Depth-extraction
Subhayan18/DeCiFer-scripts-for-NB_Mets-NatComm24
Subhayan18/ggGWAS
R package 📦 with ggplot2 extensions for GWAS summary statistics
Subhayan18/pyclone
Probabilistic model for inferring clonal population structure from deep NGS sequencing.
Subhayan18/region-plot
A tool to plot significant regions of GWAS
Subhayan18/SAIGE
Subhayan18/SignatureAnalyzer
Updated SignatureAnalyzer-GPU with mutational spectra & RNA expression compatibility.
Subhayan18/tidymanhattan
Tidyverse supported R package for GWAS data visualization