Pinned Repositories
bioinformatics-one-liners
Bioinformatics one liners from Ming Tang
bioinformatics-workbook
Bioinformatics Workbook repository
cbioportal
cBioPortal for Cancer Genomics
common_scripts
my bin directory
Darwin
facets_misc
facetsY
Algorithm to implement Fraction and Copy number Estimate from Tumor/normal Sequencing.
labs
Rmd source files for the HarvardX series PH525x
lopez_etal_2019_wgd-cancer
maftools
Summarize, Analyze and Visualize MAF files from TCGA or in house studies.
Subhi's Repositories
Subhi/bioinformatics-one-liners
Bioinformatics one liners from Ming Tang
Subhi/bioinformatics-workbook
Bioinformatics Workbook repository
Subhi/cbioportal
cBioPortal for Cancer Genomics
Subhi/common_scripts
my bin directory
Subhi/Darwin
Subhi/facets_misc
Subhi/facetsY
Algorithm to implement Fraction and Copy number Estimate from Tumor/normal Sequencing.
Subhi/labs
Rmd source files for the HarvardX series PH525x
Subhi/lopez_etal_2019_wgd-cancer
Subhi/maftools
Summarize, Analyze and Visualize MAF files from TCGA or in house studies.
Subhi/MSKCC-Oncokb-Actionability-
Scripts to make Oncokb Actionability Figure
Subhi/NGS_Data_Analysis_Course
Subhi/OncoCast
Subhi/oncokb-annotator
Annotates variants in MAF with OncoKB annotation.
Subhi/Python-
Subhi/RNASeqAnalysis
Differential gene expression analysis, GSEA, ssGSEA
Subhi/RNAseqDB
Subhi/sc_tutorial
Tutorial for the analysis of scRNA-seq data based on Seurat v3.
Subhi/scripts