This workflow demonstrates the usage of ICeDT and also evaluate its performance using a simulated dataset.
library(devtools)
devtools::install_github("Sun-lab/ICeDT")Wilson, D. R., Jin, C., Ibrahim, J. G., Sun, W. (2020). ICeD-T Provides Accurate Estimates of Immune Cell Abundance in Tumor Samples by Allowing for Aberrant Gene Expression Patterns. Journal of the American Statistical Association, 115(531), 1055-1065. [HTML, PDF]