SydneyBioX/scClassify

Change label delimiter in intermediate node output?

Opened this issue · 1 comments

Hello! Thank you for your work on this tool.

I am working with scClassify using a training dataset where some labels include an underscore _.
I noticed that the intermediate node predictions from scClassify are given as the children of the node separated by _. I am trying to recover the intermediate outputs for my analysis by separating the labels, but this causes issues when labels themselves contain _.

Could you please let me know if there is a parameter that I can alter in order to receive the node name separated by a customizable delimiter e.g. ,?

Thank you!

Hi,

Thank you for the interest of scClassify. I really appreciate your suggestion. Currently scClassify doesn't have this as a parameter yet. But I will let you know once I implemented it.

Best wishes,
Yingxin