SylviaYZ

SylviaYZ's Stars

• kitze/awesome-conference-practices

  Did you like anything in particular about a conference? Let's make an awesome list 🎉

  1.1k53

• AnaRitaNogueira/Methods-and-Tools-for-Causal-Discovery-and-Causal-Inference

  This repository is used as a support for the paper "" (to be named)

  Language:R249

• statOmics/tradeSeq

  TRAjectory-based Differential Expression analysis for SEQuencing data

  Language:HTML23828

• taiyun/corrplot

  A visual exploratory tool on correlation matrix

  Language:R31686

• harrelfe/Hmisc

  Harrell Miscellaneous

  Language:R21081

• mojaveazure/seurat-disk

  Interfaces for HDF5-based Single Cell File Formats

  Language:R14948

• SylviaYZ/IDGenomic

  Analysis on multiple cross-platform infectious disease genomics data.

  Language:R1

• zhangyuqing/ComBat-seq

  Batch effect adjustment based on negative binomial regression for RNA sequencing count data

  Language:R16139

• sunduanchen/Scissor

  Scissor package

  Language:C++18231

• thelovelab/DESeq2

  Differential expression of RNA-seq data using the Negative Binomial

  Language:R35790

• jlevy/the-art-of-command-line

  Master the command line, in one page

  153k14.6k

• PhanstielLab/plotgardener

  Language:R30028

• biodatascience/statcomp

  Statistical Computing

  Language:HTML94

• psioda/BIOS-767-Spring-2022

  BIOS-767 Course Materials

  Language:HTML65

• yuchaojiang/BIOSBCB785

  Course website for BIOS/BCB785 Statistical Methods for Gene Expression Analysis at UNC Chapel Hill

  71

• tanlabcode/CytoTalk

  A novel computational method for inferring cell-type-specific signaling networks using single-cell transcriptomics data for better characterization of cell-cell communication.

  Language:R3411

• samuel-marsh/scCustomize

  R package with collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.

  Language:R21224

• Drinchai/BloodGen3Module

  This R package for performing module repertoire analyses and generating fingerprint representations

  Language:R145

• parashardhapola/scarf

  Toolkit for highly memory efficient analysis of single-cell RNA-Seq, scATAC-Seq and CITE-Seq data. Analyze atlas scale datasets with millions of cells on laptop.

  Language:Python9612

• stemangiola/tidybulk

  Brings bulk and pseudobulk transcriptomics to the tidyverse

  Language:R16525

• chanzuckerberg/single-cell-data-portal

  The data portal supporting the submission, exploration, and management of projects and datasets to cellxgene.

  Language:TypeScript6414

• daattali/beautiful-jekyll

  ✨ Build a beautiful and simple website in literally minutes. Demo at https://beautifuljekyll.com

  Language:HTML5.4k16.2k

• kaitlyncross/BIOS784_FinalProject

  Repository for storing data, code and outputs for the BIOS 784 Final Project (red group).

  Language:HTML1

• huizezhang-sherry/cubble

  A tidy structure for spatio-temporal vector data

  Language:R557

• hbctraining/scRNA-seq_online

  Language:R514179

• STOmics/Stereopy

  A toolkit of spatial transcriptomic analysis.

  Language:Jupyter Notebook19865

• ncborcherding/scRepertoire

  A toolkit for single-cell immune profiling

  Language:R30754

• Bioconductor/bioconductor_docker

  Docker Containers for Bioconductor

  Language:Shell7331

• SylviaYZ/bios-611-project

  Project analyzing multi-omics genomics data from a COVID-19 study.

  Language:R4

• agitter/single-cell-pseudotime

  An overview of algorithms for estimating pseudotime in single-cell RNA-seq data

  40662