Pinned Repositories
An-Introduction-to-Statistical-Learning
This repository contains the exercises and its solution contained in the book "An Introduction to Statistical Learning" in python.
Bioinformatics-Training
Bioinformatics training resources
Complete-Striped-Smith-Waterman-Library
GenomicConsensus
PacBio® variant and consensus caller
hierarchical-hotnet
Hierarchical HotNet is an algorithm for finding hierarchies of active subnetworks.
hotnet2
HotNet2 is an algorithm for finding significantly altered subnetworks in a large gene interaction network
IsoCon_Eval
Evaluation scripts for IsoCon + targeted sequencing approach
jetta
A powerful, multi-protocol request library and toolkit ✈️
juncBASE
Junction Based Analysis of Splicing Events for RNA-Seq
pbdagcon
A sequence consensus algorithm implementation based on using directed acyclic graphs to encode multiple sequence alignment
Syndraii's Repositories
Syndraii/juncBASE
Junction Based Analysis of Splicing Events for RNA-Seq
Syndraii/pbdagcon
A sequence consensus algorithm implementation based on using directed acyclic graphs to encode multiple sequence alignment
Syndraii/An-Introduction-to-Statistical-Learning
This repository contains the exercises and its solution contained in the book "An Introduction to Statistical Learning" in python.
Syndraii/Bioinformatics-Training
Bioinformatics training resources
Syndraii/Complete-Striped-Smith-Waterman-Library
Syndraii/GenomicConsensus
PacBio® variant and consensus caller
Syndraii/hierarchical-hotnet
Hierarchical HotNet is an algorithm for finding hierarchies of active subnetworks.
Syndraii/hotnet2
HotNet2 is an algorithm for finding significantly altered subnetworks in a large gene interaction network
Syndraii/IsoCon_Eval
Evaluation scripts for IsoCon + targeted sequencing approach
Syndraii/jetta
A powerful, multi-protocol request library and toolkit ✈️
Syndraii/LongTron
Syndraii/MISO
MISO: Mixture of Isoforms model for RNA-Seq isoform quantitation
Syndraii/NMD-paper
A pan-cancer genome-wide analysis reveals tumour dependencies by induction of nonsense-mediated decay
Syndraii/pbsmrtpipe
PacBio Workflow Engine
Syndraii/Prodigal
Prodigal Gene Prediction Software
Syndraii/Syndraii.github.io
Syndraii/TALON
Technology agnostic long read analysis pipeline for transcriptomes
Syndraii/TALON-paper-2020
References and analyses for updated TALON paper