Automatically performs rosetta based Homology modeling. For now, semi-automatic.
For any suggestions/inquiries, please email doonam.kim@pnnl.gov
- Procedures
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Run psi-blast with pdb databank at https://blast.ncbi.nlm.nih.gov/Blast.cgi?CMD=Web&PAGE=Proteins&PROGRAM=blastp&RUN_PSIBLAST=on
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Download Hit Table (CSV) For example, ZFHADRTG016-Alignment-HitTable.csv
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python run_me.py
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Upload input_for_clustal_omega.fasta at https://www.ebi.ac.uk/Tools/msa/clustalo