TakashiKoyama

Biologist studying fish sex determination, differentiation, and sex chromosome evolution. Recently started my own lab. at Nagasaki University.

Nagasaki UniversityNagasaki, Japan

Pinned Repositories

blasr
BLASR: The PacBio® long read aligner
Language:C++00
popgen_sim_codes
Population genetics forward simulation codes written in C++
Language:C++00
seurat
R toolkit for single cell genomics
Language:R2.2k902
STREAM
STREAM: Single-cell Trajectories Reconstruction, Exploration And Mapping of single-cell data
Language:Jupyter Notebook17346
pyrho
Fast inference of fine-scale recombination rates based on fused-LASSO
Language:Python424
ptmixed
ptmixed is an R package that fits the Poisson-Tweedie generalized linear mixed model proposed in Signorelli, Spitali and Tsonaka (2021, Statistical Modelling)
Language:R21

TakashiKoyama/popgen_sim_codes
Population genetics forward simulation codes written in C++
Language:C++
TakashiKoyama/blasr
BLASR: The PacBio® long read aligner
Language:C++