Taliaferro lab
Software produced by the Taliaferro Lab for the investigation of biological phenomena
University of Colorado Anschutz Medical Campus
Pinned Repositories
AnalysisScripts
A motley collection of scripts used for analysis of high-throughput sequencing data
FeatureReachR
FoldTDP43Oligos
high throughput folding of oligonucleotides containing TDP43 motif from MPRA
LABRAT
Lightweight Alignment Based Resolution of Alternative Three Prime Ends
LS2
Code for the analysis of the splicing activity of LS2 and its mutants
OINC-seq
oxidation induced nucleotide conversions
OligoPools
Scripts to make oligonucleotide pools and analyze data from them
SubcellularRNAseqExample
Example code for the analysis of neuronal subcellular RNAseq data
teaching
teaching material
UniqueUTRseqs
Identify transcript sequences that are unique to one polyadenylation isoform
Taliaferro lab's Repositories
TaliaferroLab/LABRAT
Lightweight Alignment Based Resolution of Alternative Three Prime Ends
TaliaferroLab/teaching
teaching material
TaliaferroLab/AnalysisScripts
A motley collection of scripts used for analysis of high-throughput sequencing data
TaliaferroLab/FeatureReachR
TaliaferroLab/OINC-seq
oxidation induced nucleotide conversions
TaliaferroLab/FoldTDP43Oligos
high throughput folding of oligonucleotides containing TDP43 motif from MPRA
TaliaferroLab/LS2
Code for the analysis of the splicing activity of LS2 and its mutants
TaliaferroLab/OligoPools
Scripts to make oligonucleotide pools and analyze data from them
TaliaferroLab/SubcellularRNAseqExample
Example code for the analysis of neuronal subcellular RNAseq data
TaliaferroLab/UniqueUTRseqs
Identify transcript sequences that are unique to one polyadenylation isoform