Tang-pro

The more practice, the more perfect

Pinned Repositories

SUPPA
SUPPA: Fast quantification of splicing and differential splicing
Language:Python264 14 18562
OrthoFinder
Phylogenetic orthology inference for comparative genomics
Language:Python728 27 923189
deepTools
Tools to process and analyze deep sequencing data.
Language:Python691 43 947212
Alternative-Splice
cotton fiber stage
Language:Python00
Container
bioinformatics tools
00
Novel_isoform_analysis_per_gene
The percentage of short RNA-Seq reads mapped to novel isoforms of each gene expressed
Language:Python0 1 00
Snakemake_Isoquant
To automate the quantification of isoforms, using Snakemake to create a streamlined workflow
Language:Python0 1 00
Transposon-analysis
Identify transposon distribution on isoform
Language:Shell00
DESeq2
Differential expression of RNA-seq data using the Negative Binomial
Language:R365 24 8589
TransDecoder
TransDecoder source
Language:Perl280 17 19160

Tang-pro's Repositories

Tang-pro/Alternative-Splice
cotton fiber stage
Language:Python00
Tang-pro/Container
bioinformatics tools
00
Tang-pro/Novel_isoform_analysis_per_gene
The percentage of short RNA-Seq reads mapped to novel isoforms of each gene expressed
Language:Python0 1 00
Tang-pro/Snakemake_Isoquant
To automate the quantification of isoforms, using Snakemake to create a streamlined workflow
Language:Python0 1 00
Tang-pro/Transposon-analysis
Identify transposon distribution on isoform
Language:Shell00