This file outlines the contents of the project directory.
Scripts for running process_radtags to demultiplex ddRADseq data
Barcode files used to demultiplex ddRADseq data with process_radtags
Scripts used to align ddRADseq reads to the Anolis distichus reference genome and to call variants using bcftools
Scripts for performing PCA, ADMIXTURE, Mantel tests, and EEMS on ddRADseq datasets varying by missingness
Scripts for performing IBE and IBD analyses and GEA