/MediSeg

Models for Medical Segmentation

Primary LanguageJupyter NotebookMIT LicenseMIT

MediSeg

Models for Medical Segmentation

Setup

  1. [Optional] configure DATA folder in "config.py"
  2. Download "Segmentation_Rigid_Training.zip" at http://grand-challenge.org/site/EndoVisSub-Instrument/
  3. Copy "Segmentation_Rigid_Training.zip" into the DATA folder and run python DATA/create_filelist.py -d DATA and python DATA/create_filelist.py -d DATA --txt.

Usage

Install TensorVision

$ tv-train --hypes hypes/medseg.json