TeodoraTockovska

2016-tutorials

repo for 2016 EDAMAME tutorials

bestpracticesR

CellTagR

This repository contains the CellTag data analysis R package to support clone calling and lineage reconstruction.

Earth-Microbiome-Proj-Spatial-Patterns

This repository stores my scripts and data files for my Master's project. I analyzed the Earth Microbiome Project data to determine whether microbiome diversity varied based on distance. In other words, my work involved investigating the spatial patterns in the metadata.

F19_ExploratoryAnalyses

This is one set of exploratory data analyses that can be used to look at data sets initially. Please feel free to contribute to this repository if you would like to add your own methods of exploratory analyses

scran

Clone of the Bioconductor repository for the scran package.

TensorFlow-Examples

TensorFlow Tutorial and Examples for Beginners (support TF v1 & v2)

Trancriptome-Analyses-Tutorials-In-R

Welcome! This repository contains several tutorials that teach transcriptome analyses using R libraries DESeq2 and GOseq. The tutorials are created in RMarkdown and are written in depth to explain the relevance and purposes of the scripts.

velocyto.R

RNA velocity estimation in R

seurat

R toolkit for single cell genomics

TeodoraTockovska/velocyto.R

RNA velocity estimation in R

TeodoraTockovska/F19_ExploratoryAnalyses

This is one set of exploratory data analyses that can be used to look at data sets initially. Please feel free to contribute to this repository if you would like to add your own methods of exploratory analyses

TeodoraTockovska/scran

Clone of the Bioconductor repository for the scran package.

TeodoraTockovska/Trancriptome-Analyses-Tutorials-In-R

Welcome! This repository contains several tutorials that teach transcriptome analyses using R libraries DESeq2 and GOseq. The tutorials are created in RMarkdown and are written in depth to explain the relevance and purposes of the scripts.

TeodoraTockovska/TensorFlow-Examples

TensorFlow Tutorial and Examples for Beginners (support TF v1 & v2)

TeodoraTockovska/CellTagR

This repository contains the CellTag data analysis R package to support clone calling and lineage reconstruction.

TeodoraTockovska/Earth-Microbiome-Proj-Spatial-Patterns

This repository stores my scripts and data files for my Master's project. I analyzed the Earth Microbiome Project data to determine whether microbiome diversity varied based on distance. In other words, my work involved investigating the spatial patterns in the metadata.

TeodoraTockovska/bestpracticesR

TeodoraTockovska/2016-tutorials

repo for 2016 EDAMAME tutorials