The Kirby Institute
Quantitative and computational projects developed by researchers at the Kirby Institute
UNSW Sydney
Pinned Repositories
Cascade_calculations
Australian diagnosis and care cascade calculations
Cascade_Incidence
Estimating the contribution of each step of the HIV cascade to new infections
covid19-closed-pop-models
Spreadsheet models of COVID-19 in prisons and other closed population settings
covid19model-wpro
Application of Imperial College covid19model to model estimated deaths and cases of COVID19 in the Western Pacific region
Impact_TasP_Australia
Simple analysis of HIV treatment-as-prevention in Australia
ng_remote
NLP_Ascend_workshop
Natural Language Processing to identify substances related to overdose deaths: An R-tidymodels workshop
PrEPSTI
Individual-based, site-specific simulator of STI transmission
Simplified-HCV-testing-model
A model for examing impact of HCV testing scenarios
VC_changing_climate_BD
Vectorial capacity of A. aegypti mosquitoes in a changing climate in Bangladesh
The Kirby Institute's Repositories
The-Kirby-Institute/Cascade_Incidence
Estimating the contribution of each step of the HIV cascade to new infections
The-Kirby-Institute/covid19model-wpro
Application of Imperial College covid19model to model estimated deaths and cases of COVID19 in the Western Pacific region
The-Kirby-Institute/Impact_TasP_Australia
Simple analysis of HIV treatment-as-prevention in Australia
The-Kirby-Institute/Simplified-HCV-testing-model
A model for examing impact of HCV testing scenarios
The-Kirby-Institute/VC_changing_climate_BD
Vectorial capacity of A. aegypti mosquitoes in a changing climate in Bangladesh
The-Kirby-Institute/Cascade_calculations
Australian diagnosis and care cascade calculations
The-Kirby-Institute/covid19-closed-pop-models
Spreadsheet models of COVID-19 in prisons and other closed population settings
The-Kirby-Institute/ng_remote
The-Kirby-Institute/NLP_Ascend_workshop
Natural Language Processing to identify substances related to overdose deaths: An R-tidymodels workshop
The-Kirby-Institute/Package_BaseModel
Java class package shared among IBM developed by BH
The-Kirby-Institute/Package_RMP
Java class package for IBM for meta population in remote Indigenous community developed by BH. This model has been used for multiple projects including investigation on mobility on STI transmission, syphilis outbreak and COVID 19 outbreak.
The-Kirby-Institute/PrEPSTI
Individual-based, site-specific simulator of STI transmission
The-Kirby-Institute/COVID_prison_model
The-Kirby-Institute/EpiNow_NSW
Scripts for running EpiNow-2 on the public NSW Health COVID-19 incidence data
The-Kirby-Institute/hcv_rt_classifier
Classification of retreatment for reinfection and virological failure among people treated with direct acting antiviral therapy for hepatitis C in national pharmacuetical dispensing administrative data