TimoLassmann/kalign

number of threads

ardy20 opened this issue · 2 comments

ardy20 commented

Hi
How many cpus it use? How can we increase number of threads or CPU when using clusters?

xizhihui commented

kalign/src/run_kalign.c

Line 208 in d494b4c

{"nthreads", required_argument, 0, 'n'},

so use "-n number".

TimoLassmann commented

In version 3.3.4 this can be set using the -nthreads option.