----------------------------------------------------------------------- Kalign version 2.03, Copyright (C) 2006 Timo Lassmann http://msa.cgb.ki.se/ timolassmann@gmail.com This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation; either version 2 of the License, or any later version. This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details. You should have received a copy of the GNU General Public License along with this program; if not, write to the Free Software Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA A copy of this license is in the COPYING file. ----------------------------------------------------------------------- Installation: % ./configure % make and as root: % make install Usage: kalign [Options] infile.fasta outfile.fasta or: kalign [Options] -i infile.fasta -o outfile.fasta or: kalign [Options] < infile.fasta > outfile.fasta Options: type: kalign -h