Connectome Computation System (CCS) is designed for Discovery Science of the human brain from Lab For Functional Connectome and Development (LFCD). This is a copy of the CCS code for preprocessing with some modification.
check the demo code
ccs_preprocessing_anat_demo.sh ${subject_ID}
ccs_preprocessing_func_demo.sh ${subject_ID}
About CCS: http://lfcd.psych.ac.cn/ccs.html
Source Code: https://github.com/zuoxinian/CCS
Reference:
- Xu T, Yang Z, Jiang L, Xing XX, Zuo XN. A Connectome Computation System for discovery science of brain. Sci Bull. 2015; 60(1):86-95.
- Zuo XN, Xu T, Jiang L, Yang Z, Cao XY, He Y, Zang YF, Castellanos FX, Milham MP. Toward reliable characterization of functional homogeneity in the human brain: Preprocessing, scan duration, imaging resolution and computational space. Neuroimage. 2013; 65: 374-386.
- Jiang L, Xu T, He Y, Hou XH, Wang J, Cao XY, Wei GX, Yang Z, He Y, Zuo XN. Toward neurobiological characterization of functional homogeneity in the human cortex: Regional variation, morphological association and functional covariance network organization. Brain Struct Funct. 2015; 220: 2485-2507.