ToadBlanco

ToadBlanco's Stars

• pillowlab/fastASD

  Fast inference for high-D receptive fields using Automatic Smoothness Determination (ASD)

  Language:MATLAB92

• pillowlab/GLMspiketraintutorial_python

  Language:Jupyter Notebook439

• pillowlab/GLMspiketraintutorial

  Simple tutorial on Gaussian and Poisson GLMs for single and multi-neuron spike train data

  Language:MATLAB9035

• GerritHilgen/DREADD_RGCclass

  Matlab Live Scripts for DREADD RGC classification

  2

• cea-hpc/wi4mpi

  Wrapper interface for MPI

  Language:C8115

• BarbourLab/lussac

  Package for automatic post-processing and merging of multiple spike-sorting analyses.

  Language:Python243

• NeurodataWithoutBorders/pynwb

  A Python API for working with Neurodata stored in the NWB Format

  Language:Python17383

• Intan-Technologies/IntanToNWB

  Convert Intan (rhd or rhs) files to NWB file format

  Language:Python103

• SpikeInterface/probeinterface

  Python package to handle probe layout, geometry and wiring to device.

  Language:Python4840

• magland/sortingview

  Web app for viewing results of ephys spike sorting

  Language:TypeScript237

• SpikeInterface/spikeinterface-gui

  GUI for spikeinterface objects

  Language:Python186

• cortex-lab/phy

  phy: interactive visualization and manual spike sorting of large-scale ephys data

  Language:Python306156

• cortex-lab/KiloSort

  GPU code for spike sorting

  Language:MATLAB17299

• kwikteam/npy-matlab

  Experimental code to read/write NumPy .NPY files in MATLAB

  Language:Jupyter Notebook502210

• bonvision/BonVision

  BonVision is an open-source closed-loop visual environment generator developed by the Saleem Lab and Solomon Lab at the UCL Institute of Behavioural Neuroscience in collaboration with NeuroGEARS.

  Language:C#108

• SpikeInterface/spiketutorials

  Tutorials for using SpikeInterface on extracellular datasets.

  Language:Jupyter Notebook5934

• h5py/h5py

  HDF5 for Python -- The h5py package is a Pythonic interface to the HDF5 binary data format.

  Language:Python2k522

• Intan-Technologies/load-rhd-notebook-python

  Jupyter Notebook that demonstrates using Python to load an .rhd data file.

  Language:Python49

• sitiny/mr-to-pct

  MR to CT for TUS acoustic simulations

  Language:Jupyter Notebook157

• eytandomany/SPC

  Super paramagnetic Clustering - Marcelo Blatt, Shai Wiseman, and Eytan Domany (1996)

  Language:C41

• MATLAB-Graphics-and-App-Building/spike-raster-plot

  A spike raster plot from spike time stamps with optional trial and group data.

  Language:MATLAB81

• peterzh/easy-plot-neural

  Easy plotting for spiking raster/psths, and other event-aligned averages

  Language:MATLAB7

• danielkentwood/NERF

  Nonlinear Estimation of Receptive Fields

  Language:Jupyter Notebook1

• maxwellsdm1867/RetinaMultiChan

  MEA recording and data extraction, this is non-specific function and scripts

  Language:MATLAB1

• spyking-circus/spyking-circus

  Fast and scalable spike sorting in python

  Language:Python8253

• csn-le/wave_clus

  A fast and unsupervised algorithm for spike detection and sorting using wavelets and super-paramagnetic clustering

  Language:MATLAB12065

• MouseLand/Kilosort

  Fast spike sorting with drift correction for up to a thousand channels

  Language:Python431228

• paninski-lab/yass

  YASS: Yet Another Spike Sorter

  Language:Python6215

• MattiaDif/model-based-spike-detection

  Spike detection algorithms developed in Simulink environment.

  Language:MATLAB61

• pillowlab/iSTAC

  information-theoretic Spike-Triggered Average and Covariance (iSTAC) estimator for receptive fields

  Language:Matlab41