/ipynb-lamanno2016

Notebook and examples related to La Manno and Gyllborg et al. 2016

Primary LanguageJupyter Notebook

ipynb-lamanno2016

Code, notebook and examples related to La Manno and Gyllborg et al. 2016

Requirements

Install Anaconda: https://www.continuum.io/downloads

After installation, use the conda update command to update conda: conda update conda

To execute the pseudotime analysis R and rpy2 libraries must be installed

Get started

  • Download/Clone the sourcecode
  • Move to the folder cd ipynb-lamanno2016
  • Run jupyter notebook jupyter
  • Select the notebook and run it