Pinned Repositories
alignment_vis
androhid
Automatically exported from code.google.com/p/androhid
aoc2018
solutions for Advent of Code 2018
bioconda-recipes
Conda recipes for the bioconda channel.
generateNanoporeReads
given perfect sequences in FASTA format, this script generates messier reads with fixed error rates
kmer_analyses
merge_pcr_duplicates
Tool for iCLIP data analysis. Merges PCR duplicates according to random barcodes that were extracted earlier.
OpenMSToGalaxy
Create wrappers for Galaxy from the cli description of the TOPP tools
TorHou's Repositories
TorHou/generateNanoporeReads
given perfect sequences in FASTA format, this script generates messier reads with fixed error rates
TorHou/kmer_analyses
TorHou/merge_pcr_duplicates
Tool for iCLIP data analysis. Merges PCR duplicates according to random barcodes that were extracted earlier.
TorHou/OpenMSToGalaxy
Create wrappers for Galaxy from the cli description of the TOPP tools
TorHou/alignment_vis
TorHou/androhid
Automatically exported from code.google.com/p/androhid
TorHou/aoc2018
solutions for Advent of Code 2018
TorHou/bioconda-recipes
Conda recipes for the bioconda channel.
TorHou/blockbuster_fixes
TorHou/blockbuster_rewrite
rewrite of blockbuster in python
TorHou/column_sort
sorts columns by the header description
TorHou/continuous-integration-circle
TorHou/docker-ipython-notebook
IPython running in a docker container. This image can be used to integrate IPython into Galaxy
TorHou/download_store
universal storage
TorHou/GalaxyConfigGenerator
Given a CTD file, GalaxyConfigGenerator generates a Galaxy wrapper
TorHou/galaxytools
Galaxy Tool wrappers
TorHou/gscripts
General Use Scripts and Helper functions
TorHou/hash-cgmlst
TorHou/helper-scripts
TorHou/jBardeen
For calculation of STM images from VASP output
TorHou/jupyter-notebooks
Collection of more or less illustrative notebooks
TorHou/MentaLiST
The MLST pipeline developed by the PathOGiST research group
TorHou/minimap2
A versatile pairwise aligner for genomic and spliced nucleotide sequences
TorHou/mission_course_material
A bioinformatics course on MLST and variant calling
TorHou/posters
This poster details the infrastructure, services and methods the RBC will employ to provide comprehensive bioinformatics services and how Galaxy is used to provide an integrated workbench for RNA analysis.
TorHou/RNAshapesWrapper
Galaxy wrapper xml file for RNAshapes
TorHou/STAR
RNA-seq aligner
TorHou/tools-iuc
Tool Shed repositories maintained and developed by the Intergalactic Utilities Commission
TorHou/training-material
A collection of training material from offered Galaxy courses