Experiments related to the results showed in the article describing Pirat.
All instructions to download and install Pirat package are available on the following repository: https://github.com/prostarproteomics/Pirat. Pirat requires R 4.4.0.
The code of experiments and figures related to benchmark datasets (Cox2014, Bouyssié2020 and Huang2020) is in the folder experiment1/.
The code of experiments and figures related to mask and impute experiments on Capizzi2020 and Vilallongue2020 is in the folder experiment2/.
The code of experiments and figures related to mask and impute experiments on Ropers2021 and Habowski2020 is in the folder experiment3/.