TullyMonster/MendelRookie

Issues

• 1_correlation_analysis遇到错误

  #27 opened 3 months ago by Stardust3939
  0

• 我遇到了新的问题 ，无法解决

  #26 opened 3 months ago by Hopeofhill
  0

• 报错@2_Linkage_disequilibrium_analysis.R: Error in get_plink_exe() : could not find function "get_plink_exe"

  #9 opened 10 months ago by xgxofdream
  7

• 运行5_do_MR2.R 报错：Error in file(file, "rt") : 无法打开链结

  #24 opened 7 months ago by xgxofdream
  1

• 运行5_do_MR1.R 报错：Error in eval(e, x, parent.frame()) : 找不到对象'mr_keep'

  #23 opened 7 months ago by xgxofdream
  1

• 4_remove_confounder.R 报错：Error in .look_trait.default(rsids, pval = pval, out_file = out_file) : 找不到对象'association_data'

  #22 opened 7 months ago by xgxofdream
  0

• 2_linkage_disequilibrium_analysis报错没有"get_plink_exe"这个函数`

  #21 opened 7 months ago by xgxofdream
  1

• 执行0_1data_formating程序中format_gwas_data函数，意外终止

  #20 opened 9 months ago by Walkingfun
  3

• 关于remove_confounder，如果不剔除混杂因素

  #19 opened 9 months ago by A-Ben-Mao
  2

• bug? typo?

  #18 opened 9 months ago by laleoarrow
  2

• 仅仅pval小于0.00099的SNPs被提取出来 by 0_1data_formating.R中的MungeSumstats::format_sumstats

  #17 opened 10 months ago by xgxofdream
  1

• 请问0_1data_formating生成的gwas文件里的栏目名FDR是什么的简称？

  #15 opened 10 months ago by xgxofdream
  2

• 请问怎么用0_1data_formating.R读出vcf格式文件里的AF

  #16 opened 10 months ago by xgxofdream
  3

• 0_1data_formating从格式化暴露数据开始报错

  #14 opened 10 months ago by aozaoa
  1

• 能否提供已经Formatted Data，这样你的教程就完备了。

  #7 opened 10 months ago by xgxofdream
  1

• New Backage for u: MRInstruments

  #13 opened 10 months ago by xgxofdream
  1

• Issue on TwoSampleMR@5_do_MR1.R

  #12 opened 10 months ago by xgxofdream
  1

• 2_linkage_disequilibrium_analysis.R报错：file47f0dd88d9.clumped

  #11 opened 10 months ago by xgxofdream
  1

• 执行0_1data_formating程序时，得到报错

  #1 opened 10 months ago by xgxofdream
  6

• MungeSumstats相关的报错@0_1data_formating.R

  #3 opened 10 months ago by xgxofdream
  2

• 哪里能找到FastTraitR和FastDownloader

  #6 opened 10 months ago by xgxofdream
  3

• 报错@5_do_MR1.R: could not find function "run_mr_presso" 等

  #10 opened 10 months ago by xgxofdream
  6

• 绘制曼哈顿图报错：could not find function "CMplot" @1_correlation_analysis

  #8 opened 10 months ago by xgxofdream
  2

• 报错Error in validate_parameters@0_1Data_formating

  #5 opened 10 months ago by xgxofdream
  2

• 安装SNPlocs.Hsapiens.dbSNP155.GRCh37_0.99.24.tar

  #4 opened 10 months ago by xgxofdream
  2

• Env_initi的报错

  #2 opened 10 months ago by xgxofdream
  5