Cancer Systems Biology Center of HoPE
U54 bioinformatics working group supporting the NCI/CSBC U54 Cancer Systems Biology Center of HoPE (Heterogeneity of Phenotypic Evolution)
Monrovia, California
Pinned Repositories
01B_Preprocess_DNAseq
02B_scRNAseq_CellTypeAnnotation
03A_scRNA_Archetype_Mutitasklearning_Analysis
CAMA1_resistance
Differential expression analysis of CAMA-1 cells in the context of ribociclib resistance and facilitation.
FacilitationRibociclibBreast
Repository for primary and supplemental resources related to analyses of facilitation between resistant and sensitive ER+ breast cancer cell lineages under cell cycle inhibitor therapy.
FELINE_project
Feng_TME_subclone
ONC201_Manuscript_2022
PhylinSic_Project
scRNA-Seq-Variants-calling
Cancer Systems Biology Center of HoPE's Repositories
U54Bioinformatics/FELINE_project
U54Bioinformatics/PhylinSic_Project
U54Bioinformatics/scRNA-Seq-Variants-calling
U54Bioinformatics/01B_Preprocess_DNAseq
U54Bioinformatics/01A_Preprocess_scRNAseq
U54Bioinformatics/02A_scRNAseq_Seurat
U54Bioinformatics/02B_scRNAseq_CellTypeAnnotation
U54Bioinformatics/02H_WGS_WES_Mutation_Signature
U54Bioinformatics/03A_scRNA_Archetype_Mutitasklearning_Analysis
U54Bioinformatics/CAMA1_resistance
Differential expression analysis of CAMA-1 cells in the context of ribociclib resistance and facilitation.
U54Bioinformatics/FacilitationRibociclibBreast
Repository for primary and supplemental resources related to analyses of facilitation between resistant and sensitive ER+ breast cancer cell lineages under cell cycle inhibitor therapy.
U54Bioinformatics/Feng_TME_subclone
U54Bioinformatics/ONC201_Manuscript_2022
U54Bioinformatics/02C_scRNAseq_Pathway
U54Bioinformatics/02D_scRNAseq_CNV_subclone
U54Bioinformatics/02E_WGS_WES_Subclone
U54Bioinformatics/02F_sRNAseq_velocity_analysis
U54Bioinformatics/02G_scRNAseq_Differential_Expression
U54Bioinformatics/02I_scRNAseq_Genotyping
U54Bioinformatics/02J_scRNAseq_Doublet_Detection
U54Bioinformatics/Scripts_for_Apollo