Pinned Repositories
margin
marginAlign
UCSC Nanopore
MarginPolish
MarginPolish: Graph based assembly polishing
nanopore-RNN
Collaboration repository with Nanopore Group
nanopore-toolkit
Nanopore toolkit for basic processing of nanopore reads
NaRLE
Nanopore Run Length Encoding: analysis pipeline
PyPore
Tools used to analyze data from nanopore-based experiments.
signalAlign
HMM-HDP models for MinION signal alignments
sonLib
Small general purpose library for C and Python with focus on bioinformatics.
toil-marginPhase
TOIL marginPhase pipeline
UCSC Nanopore and CGL's Repositories
UCSC-nanopore-cgl/MarginPolish
MarginPolish: Graph based assembly polishing
UCSC-nanopore-cgl/margin
UCSC-nanopore-cgl/signalAlign
HMM-HDP models for MinION signal alignments
UCSC-nanopore-cgl/PyPore
Tools used to analyze data from nanopore-based experiments.
UCSC-nanopore-cgl/marginAlign
UCSC Nanopore
UCSC-nanopore-cgl/nanopore-RNN
Collaboration repository with Nanopore Group
UCSC-nanopore-cgl/nanopore-toolkit
Nanopore toolkit for basic processing of nanopore reads
UCSC-nanopore-cgl/NaRLE
Nanopore Run Length Encoding: analysis pipeline
UCSC-nanopore-cgl/sonLib
Small general purpose library for C and Python with focus on bioinformatics.
UCSC-nanopore-cgl/toil-marginPhase
TOIL marginPhase pipeline