UoS-HGIG

Pinned Repositories

GenePy
GenePy v1.2 a score for the analysis of next generation sequencing data
Language:Python2 3 42
GenePy-1.3
Latest GenePy version compatible with both GRCh38 and GRCh37(hg19)
Language:Python02
GenePy-1.4
Latest GenePy version using Ensembl VEP annotation, gnomAD random forest flag. Incorporation of tri-allelic variants *in progress*
Language:Python7 2 10
GenePy-2
Language:Shell0 2 00
grf
Generalized Random Forests
Language:C++00
peddy
genotype :: ped correspondence check, ancestry check, sex check. directly, quickly on VCF
Language:Jupyter Notebook00
SNPRelate
Codes for generating PCA plots from VCF files
Language:R01
VCF-liftover
Liftover VCF files
Language:Shell00
WES_2022_QC_pipeline
Language:R00
WES_multicalling_pipeline_2020
Language:Shell00

UoS-HGIG's Repositories

UoS-HGIG/GenePy-1.4
Latest GenePy version using Ensembl VEP annotation, gnomAD random forest flag. Incorporation of tri-allelic variants *in progress*
Language:Python7 2 10
UoS-HGIG/GenePy
GenePy v1.2 a score for the analysis of next generation sequencing data
Language:Python2 3 42
UoS-HGIG/GenePy-1.3
Latest GenePy version compatible with both GRCh38 and GRCh37(hg19)
Language:Python02
UoS-HGIG/GenePy-2
Language:Shell0 2 00
UoS-HGIG/grf
Generalized Random Forests
Language:C++00
UoS-HGIG/peddy
genotype :: ped correspondence check, ancestry check, sex check. directly, quickly on VCF
Language:Jupyter Notebook00
UoS-HGIG/SNPRelate
Codes for generating PCA plots from VCF files
Language:R01
UoS-HGIG/VCF-liftover
Liftover VCF files
Language:Shell00
UoS-HGIG/WES_2022_QC_pipeline
Language:R00
UoS-HGIG/WES_multicalling_pipeline_2020
Language:Shell00