Utrecht University
The central place for managing code and software for Utrecht University researchers and employees
Utrecht, The Netherlands
Pinned Repositories
awesome-utrecht-university
A curated list of awesome open source projects from Utrecht University.
best-practices
Best practices for git, GitHub, and research software development. Tailored for researchers of Utrecht University
davrods
An Apache WebDAV interface to iRODS
getting-started
Getting started with GitHub @UtrechtUniversity
ricgraph
Ricgraph - Research in context graph
SWORDS-template
Template to implement the SWORDS framework for your organisation
SWORDS-UU
Implementation of the SWORDS framework for Utrecht University.
uucls
This is a library of latex classes for creating documents according to the Utrecht University style guide.
workshop-introduction-to-R-and-data
Material for the workshop 'Introduction to R & data'
yoda
A system for reliable, long-term storing and archiving large amounts of research data during all stages of a study.
Utrecht University's Repositories
UtrechtUniversity/yoda
A system for reliable, long-term storing and archiving large amounts of research data during all stages of a study.
UtrechtUniversity/ricgraph
Ricgraph - Research in context graph
UtrechtUniversity/iBridges
A wrapper around the python-irodsclient to allow for easy interaction with iRODS servers.
UtrechtUniversity/dataprivacyhandbook
Repository for the Data Privacy Handbook @UtrechtUniversity, a practical guide on handling personal data in scientific research
UtrechtUniversity/yoda-portal
Web portal for Yoda: https://github.com/UtrechtUniversity/yoda
UtrechtUniversity/workshop-computational-reproducibility
Material for the workshop 'Best Practices for Writing Reproducible Code'
UtrechtUniversity/yoda-ruleset
iRODS ruleset and policies for Yoda: https://github.com/UtrechtUniversity/yoda
UtrechtUniversity/researchcloud-items
Installation scripts for SURF ResearchCloud catalog components
UtrechtUniversity/msl_vocabularies
UtrechtUniversity/uu-quarto-presentation-template
Template repository for creating a UU styled Quarto presentation
UtrechtUniversity/SRC-test-workspace
Packer definitions and scripts for generating containers and VMs mimicking SURF Research Cloud workspaces.
UtrechtUniversity/BayesianEstimation
Github page for the summerschool course "A gentle introduction to Bayesian Estimation"
UtrechtUniversity/open-textbooks
Repository to create an open textbook about creating open textbooks with Quarto, hosted on GitHub
UtrechtUniversity/.github
The look and feel of Utrecht University on GitHub
UtrechtUniversity/autumn-fair
Follow up on Summer-Fair.
UtrechtUniversity/containerplatform-docs
Container Platform public documentation
UtrechtUniversity/ibridges-ansible
Ansible modules for syncing data with iRODS using iBridges.
UtrechtUniversity/cd2-ansible
Ansible scripts for the deployment of the CD² metadata catalogue
UtrechtUniversity/FSW-Openshift
UtrechtUniversity/galaxy-tools-ibridges
iBridges-based tools for Galaxy to interact with iRODS/YODA
UtrechtUniversity/lexces-silicosis-predict
This repository contains the code and documentation for the evaluation of a diagnostic prediction rule for silicosis
UtrechtUniversity/Mediaproducties-Web-Stories
Tool for creating interactive web apps
UtrechtUniversity/msl_api
UtrechtUniversity/researchcloud-items-win
Powershell scripts for SURF ResearchCloud components.
UtrechtUniversity/sol
UtrechtUniversity/src-component-galaxy
Galaxy Workflow manager for SURF Research Cloud
UtrechtUniversity/SRC-molecule
A set of molecule configuration files to faciliate testing of SURF Research Cloud items.
UtrechtUniversity/src-plugin-os
Fork of https://gitlab.com/rsc-surf-nl/plugins/plugin-os
UtrechtUniversity/vre-docs
User documentation for Research Cloud tailored at UU researchers
UtrechtUniversity/wildlifenl-research