Veraqxb

Veraqxb's Stars

• shuyuzheng/Chloroplot

  A R tool to parse and visualize chloroplast genomes

  Language:R92

• broadinstitute/picard

  A set of command line tools (in Java) for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF.

  Language:Java984368

• lh3/bwa

  Burrow-Wheeler Aligner for short-read alignment (see minimap2 for long-read alignment)

  Language:C1.5k557

• DaehwanKimLab/hisat2

  Graph-based alignment (Hierarchical Graph FM index)

  Language:C++478119

• Kinggerm/GetOrganelle

  Organelle Genome Assembly Toolkit (Chloroplast/Mitocondrial/ITS)

  Language:Python27552

• marbl/canu

  A single molecule sequence assembler for genomes large and small.

  Language:C++660179

• mikolmogorov/Flye

  De novo assembler for single molecule sequencing reads using repeat graphs

  Language:C790168

• tseemann/barrnap

  :microscope: :leo: Bacterial ribosomal RNA predictor

  Language:Perl22640

• ablab/quast

  Genome assembly evaluation tool

  Language:AMPL40978

• billzt/PrimerServer2

  PrimerServer2: a high-throughput primer design and specificity-checking platform

  Language:Python7714