VergaJU's Stars
jalberge/catchthefish
CatchTheFISH is a method to extract reads candidates from IGH translocations from whole-genome sequencing data.
biomap-research/scFoundation
GuerreroVazquez/Transcription_factor_analysis
Transcription factor analysis for RNAseq data.
GuerreroVazquez/batch_correction
Using pyCombat and reCombat apply batch correcto to RNAseq and Microarray data.
cheshire-cat-ai/core
Production ready AI agent framework
saezlab/liana
LIANA: a LIgand-receptor ANalysis frAmework
tanaylab/metacells
Metacells - Single-cell RNA Sequencing Analysis
aertslab/SCENIC
SCENIC is an R package to infer Gene Regulatory Networks and cell types from single-cell RNA-seq data.
Bianca-Pasat/Omics
Different scripts for analyzing RNA-seq, proteomics, metabolomics etc
gambalab/gficf
An R implementation of the Gene Frequency - Inverse Cell Frequency method for single cell data normalization
GuerreroVazquez/LongHack
Project for the longhack
neurorestore/Libra
cellgeni/sceasy
A package to help convert different single-cell data formats to each other
theislab/scarches
Reference mapping for single-cell genomics
satijalab/seurat
R toolkit for single cell genomics
mdozmorov/scRNA-seq_notes
A list of scRNA-seq analysis tools
imsb-uke/scGAN
Realistic in silico generation and augmentation of single cell RNA-seq data using Generative Adversarial Neural Networks
Sarah145/batch_correct
Comparison of batch correction methods for scRNA-seq data - basically a clone of BatchBench
GuerreroVazquez/Muscle_wasting
Mirna_Muscle_Waisting
BarryDigby/Cloud_CIX
Documentation for baby clouds