Victorian-Bioinformatics-Consortium/degust

How to modify MDS plots (95% confidence intervals, etc)

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The MDS plots are great in Degust but I would like to be able to plot 95% confidence intervals around experimental groups in the plots and be able to make further modifications. I know you can download the code that's used to prepare this data but I don't know if the code to make these plots is available in the code. Any help would be greatly appreciated.