VivaswatS/wolbachia_lycaeides

Scripts to extract Wolbachia reads from Lycaeides

1. Mapping to reference files: .pl & .sh
2. Examining reads: getlongestread.R
3. Constructing haplotypes: mkhaplo.R

Host reference files to still be uploaded.

Accompanying preprint: 10.22541/au.164703040.01856976/v1